Detailed information of matrix profile MA1017.1

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Profile summary
Name: GATA8
Matrix ID: MA1017.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 12504119
Uniprot ID: Q9SV30  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 179 89 453 192 977 6 13 131 214 ]
C [ 320 369 108 132 0 2 899 152 261 ]
G [ 187 158 379 649 21 1 29 241 319 ]
T [ 314 384 60 27 2 991 59 476 207 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1017.1 MA1017 1 GATA8 Arabidopsis thaliana
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: