Detailed information of matrix profile MA1014.1

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Profile summary
Name: GATA11
Matrix ID: MA1014.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 12504119
Uniprot ID: Q6DBP8  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 131 999 0 999 0 0 0 624 ]
C [ 695 0 0 0 0 999 97 167 ]
G [ 131 0 999 0 0 0 0 42 ]
T [ 44 0 0 0 999 0 902 167 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1014.1 MA1014 1 GATA11 Arabidopsis thaliana
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0343.1

ChIP-seq Centrality
log(P-value): -6576.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0343.1

ChIP-seq Centrality
log(P-value): -6591.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: