Detailed information of matrix profile MA0952.1

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Profile summary
Name: ATHB-51
Matrix ID: MA0952.1
Class: Homeo domain factors
Family: HD-ZIP factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554366
Uniprot ID: Q9LZR0  
Source:
Comment: Data is from PMID:24477691

Sequence logo

Frequency matrix

         
A [ 100 965 984 3 580 988 7 51 ]
C [ 777 12 4 5 3 1 4 4 ]
G [ 18 18 2 2 6 8 5 253 ]
T [ 105 5 10 990 411 2 985 691 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0952.1 MA0952 1 ATHB-51 Arabidopsis thaliana
HD-ZIP factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0357.1

ChIP-seq Centrality
log(P-value): -39944.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0357.1

ChIP-seq Centrality
log(P-value): -40877.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: