Detailed information of matrix profile MA0898.1

Profile summary

Name: Hmx3
Matrix ID: MA0898.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: P42581  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0043.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 64 19 6 18 35 7 5 94 99 1 1 4 15 6 10 13 9 ]
C [ 13 18 26 38 12 3 2 0 0 0 16 0 59 11 19 25 21 ]
G [ 10 11 21 18 15 2 0 4 0 12 0 94 10 7 23 49 21 ]
T [ 13 52 47 26 39 87 92 1 1 87 84 2 15 76 48 12 49 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles