Detailed information of matrix profile MA0851.1

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Profile summary
Name: Foxj3
Matrix ID: MA0851.1
Class: Fork head / winged helix factors
Family: Forkhead box (FOX) factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: Q8BUR3  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs: 467
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PB0017.1 based on new evidence from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 27 34 48 51 35 30 1 91 96 99 0 99 79 57 22 27 24 ]
C [ 26 13 19 13 13 1 2 8 2 0 81 0 7 9 34 27 39 ]
G [ 21 31 16 17 33 68 0 0 0 0 0 0 6 7 26 24 17 ]
T [ 26 22 17 19 20 0 97 0 3 1 18 1 9 27 18 22 19 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

External links

              
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0851.1 MA0851 1 Foxj3 Mus musculus
Forkhead box (FOX) factors Fork head / winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: