Detailed information of matrix profile MA0816.1

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Profile summary
Name: Ascl2
Matrix ID: MA0816.1
Class: Basic helix-loop-helix factors (bHLH)
Family: MyoD / ASC-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 19443739
Uniprot ID: O35885  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 199 94 2 300 1 18 15 1 1 16 ]
C [ 28 15 300 0 2 300 0 0 172 63 ]
G [ 101 206 1 0 300 23 0 300 41 36 ]
T [ 34 6 0 4 3 7 300 3 128 237 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0816.1 MA0816 1 Ascl2 Mus musculus
MyoD / ASC-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: