Detailed information of matrix profile MA0814.1

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Profile summary
Name: TFAP2C(var.2)
Matrix ID: MA0814.1
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16420676
Uniprot ID: Q92754  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2370 97 0 17 56 867 4740 595 0 71 2150 ]
C [ 1870 694 7757 7757 1139 2871 1117 33 148 6921 566 ]
G [ 509 7064 108 85 837 2896 1751 7757 7757 836 2292 ]
T [ 3008 127 0 1038 5725 1124 148 3 0 159 2750 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0814.1 MA0814 1 TFAP2C(var.2) Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0118.1

ChIP-seq Centrality
log(P-value): -9745.79

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0118.1

ChIP-seq Centrality
log(P-value): -7426.44

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: