Detailed information of matrix profile MA0812.1

  1. Home
  2. Matrix > MA0812.1

Profile summary
Name: TFAP2B(var.2)
Matrix ID: MA0812.1
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16420676
Uniprot ID: Q92481  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1784 36 0 0 16 576 3480 235 6 47 1822 ]
C [ 1412 609 4549 4549 1204 2126 608 4 10 4250 371 ]
G [ 232 3940 4 1 612 1498 446 4549 4549 299 1149 ]
T [ 1121 30 0 158 2716 348 14 2 1 25 1207 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0812.1 MA0812 1 TFAP2B(var.2) Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0115.1

ChIP-seq Centrality
log(P-value): -6376.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0115.1

ChIP-seq Centrality
log(P-value): -5855.31

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: