Detailed information of matrix profile MA0766.1

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Profile summary
Name: GATA5
Matrix ID: MA0766.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 1638017
Uniprot ID: Q9BWX5  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2359 0 2359 0 2359 2359 401 975 ]
C [ 1020 0 0 0 183 210 708 427 ]
G [ 166 2359 5 0 30 356 989 755 ]
T [ 1743 0 0 2359 535 352 261 202 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0766.1 MA0766 1 GATA5 Homo sapiens
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: