Detailed information of matrix profile MA0757.1

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Profile summary
Name: ONECUT3
Matrix ID: MA0757.1
Class: Homeo domain factors
Family: HD-CUT factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8887657
Uniprot ID: O60422  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2839 3851 6080 6080 6080 6080 32 23 3950 6080 43 6080 3620 1862 ]
C [ 1022 379 274 173 28 5 103 6080 20 6 6 105 861 1271 ]
G [ 1388 1141 498 112 102 41 14 3 2130 9 7 187 417 633 ]
T [ 831 709 878 1221 54 11 6080 5 11 22 6080 345 1182 2315 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0757.1 MA0757 1 ONECUT3 Homo sapiens
HD-CUT factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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