Detailed information of matrix profile MA0742.1

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Profile summary
Name: Klf12
Matrix ID: MA0742.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Krüppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 16266294
Uniprot ID: O35738  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 330 429 290 403 483 13 13 4 16 4 0 3 9 0 225 ]
C [ 141 117 84 99 0 0 9 0 1348 0 2 12 8 531 1158 ]
G [ 210 186 239 219 120 715 706 687 1 675 27 670 668 11 35 ]
T [ 271 238 308 238 410 0 0 0 215 9 853 5 19 553 167 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0742.1 MA0742 1 Klf12 Mus musculus
Three-zinc finger Krüppel-related factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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