Detailed information of matrix profile MA0728.1

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Profile summary
Name: Nr2f6(var.2)
Matrix ID: MA0728.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 12690040
Uniprot ID: P43136  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 0 3 369 5 0 0 59 9 1 51 378 0 0 3 0 ]
C [ 9 0 0 155 324 0 94 7 0 1 1 183 210 53 172 ]
G [ 0 678 0 0 0 0 0 4 30 667 0 0 0 0 16 ]
T [ 446 0 2 0 0 258 165 406 494 0 0 1 0 265 100 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0728.1 MA0728 1 Nr2f6(var.2) Mus musculus
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: