Detailed information of matrix profile MA0723.1

  1. Home
  2. Matrix > MA0723.1

Profile summary
Name: VAX2
Matrix ID: MA0723.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: Q9UIW0  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 3069 562 14297 14297 218 565 14297 6482 ]
C [ 2869 3818 5673 564 94 414 221 1384 ]
G [ 5648 179 987 161 213 2781 2823 7816 ]
T [ 2711 14297 1341 576 14297 14297 1410 921 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0723.1 MA0723 1 VAX2 Homo sapiens
NK-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: