Detailed information of matrix profile MA0715.1

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Profile summary
Name: PROP1
Matrix ID: MA0715.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: O75360  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 63 575 575 41 28 183 575 575 2 13 575 ]
C [ 12 0 0 39 209 57 38 3 0 18 0 ]
G [ 10 0 2 18 20 78 0 46 0 6 15 ]
T [ 575 11 0 575 367 258 33 6 575 575 47 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0715.1 MA0715 1 PROP1 Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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