Detailed information of matrix profile MA0690.1

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Profile summary
Name: TBX21
Matrix ID: MA0690.1
Class: T-Box factors
Family: TBrain-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16285859
Uniprot ID: Q9UL17  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2322 4395 612 2 6 1 185 80 4395 4395 ]
C [ 263 30 239 17 180 0 331 126 0 441 ]
G [ 937 359 4395 4395 16 4395 34 4395 38 317 ]
T [ 872 146 398 33 4395 2 4395 364 0 1287 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0690.1 MA0690 1 TBX21 Homo sapiens
TBrain-related factors T-Box factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0208.1

ChIP-seq Centrality
log(P-value): -2155.67

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0208.1

ChIP-seq Centrality
log(P-value): -1539.17

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: