Detailed information of matrix profile MA0676.1

Profile summary

Name: Nr2e1
Matrix ID: MA0676.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 10706625
Uniprot ID: Q9Y466  
Pazar TF: TF0000734
TFBSshape ID:
TFencyclopedia IDs: 182
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 247 0 112 1118 8 5 19 369 401 ]
C [ 117 0 12 0 1118 74 101 448 191 ]
G [ 131 0 1118 58 0 0 1 89 244 ]
T [ 1118 1118 11 0 40 1118 1118 1118 1118 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.