Detailed information of matrix profile MA0652.1

  1. Home
  2. Matrix > MA0652.1

Profile summary
Name: IRF8
Matrix ID: MA0652.1
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21731497
Uniprot ID: Q02556  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 5878 15 0 68 0 0 1228 6 3 33 0 2 884 2002 ]
C [ 8 1061 0 2 3 5878 0 580 0 0 0 5878 19 571 ]
G [ 1454 5878 5 0 0 0 5878 5878 0 0 2 0 5878 1996 ]
T [ 321 11 5878 5878 5878 0 6 54 5878 5878 5878 3 63 1309 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0652.1 MA0652 1 IRF8 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: