Detailed information of matrix profile MA0632.1

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Profile summary
Name: Tcfl5
Matrix ID: MA0632.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: PBM
Validation: 15585666
Uniprot ID: Q32NY8  
Source:
Comment: Data is from Weirauch PBM (2014)

Sequence logo

Frequency matrix

         
A [ 263 113 58 372 6 71 227 51 296 226 ]
C [ 203 227 874 64 904 19 336 17 364 308 ]
G [ 308 364 17 336 19 904 64 874 227 203 ]
T [ 226 296 51 227 71 6 372 58 113 263 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0632.1 MA0632 1 Tcfl5 Mus musculus
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: