Detailed information of matrix profile MA0621.1

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Profile summary
Name: mix-a
Matrix ID: MA0621.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Xenopus laevis
Data Type: PBM
Validation: 23332764
Uniprot ID: P21711  
Source:
Comment: Data is from Weirauch PBM (2014)

Sequence logo

Frequency matrix

         
A [ 301 184 21 1000 1000 0 0 1000 679 244 229 ]
C [ 290 488 21 0 0 0 0 0 46 261 229 ]
G [ 205 100 21 0 0 0 0 0 146 150 229 ]
T [ 205 228 938 0 0 1000 1000 0 130 345 312 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0621.1 MA0621 1 mix-a Xenopus laevis
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: