Detailed information of matrix profile MA0600.1

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Profile summary
Name: RFX2
Matrix ID: MA0600.1
Class: Fork head / winged helix factors
Family: RFX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8754849
Uniprot ID: P48378  
Pazar TF:
TFBSshape ID: 374
TFencyclopedia IDs: 820
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 373 62 192 431 34 1 1567 164 581 193 214 2095 2312 0 760 588 406 585 620 ]
C [ 141 184 736 317 1936 2162 432 222 0 5 1932 8 0 2294 784 403 831 630 668 ]
G [ 1716 317 64 910 121 7 41 94 1765 2146 0 170 28 0 539 1178 733 761 678 ]
T [ 116 1783 1354 688 255 176 306 1866 0 2 200 73 6 52 263 177 376 370 380 ]

Binding sites information

   

TFBS profiles

External links

              
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0600.1 MA0600 1 RFX2 Homo sapiens
RFX-related factors Fork head / winged helix factors
MA0600.2 MA0600 2 RFX2 Homo sapiens
RFX-related factors Fork head / winged helix factors
     

log(P-value) = -1688.91

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: regulatory factor X, 2 (influences HLA class II expression)

Alias: FLJ14226

Symbol: RFX2

Consensus:

Included Models:

GC Content: