Detailed information of matrix profile MA0583.1

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Profile summary
Name: RAV1(var.2)
Matrix ID: MA0583.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 9862967
Uniprot ID: Q9ZWM9  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 22 13 8 40 1 0 0 0 24 12 12 8 ]
C [ 12 15 49 6 56 65 0 0 7 15 14 20 ]
G [ 10 8 1 8 3 0 0 58 19 18 16 5 ]
T [ 18 28 7 11 5 0 65 0 5 9 10 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0583.1 MA0583 1 RAV1(var.2) Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: