Detailed information of matrix profile MA0549.1

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Profile summary
Name: BZR2
Matrix ID: MA0549.1
Class:
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-chip
Validation: 15680330
Uniprot ID: Q9LN63  
Pazar TF:
TFBSshape ID: 348
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 23 41 0 89 0 0 0 3 16 17 36 ]
C [ 45 8 99 0 99 0 0 0 5 33 29 ]
G [ 10 50 0 4 0 99 0 96 36 46 33 ]
T [ 21 0 0 6 0 0 99 0 42 3 1 ]

Binding sites information

   

TFBS profiles

External links

         
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0549.1 MA0549 1 BZR2 Arabidopsis thaliana
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: