Detailed information of matrix profile MA0498.2

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Profile summary
Name: MEIS1
Matrix ID: MA0498.2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9405651
Uniprot ID: O00470  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 23727 8690 0 77159 0 77159 17224 ]
C [ 18797 5575 1249 2903 77159 0 14864 ]
G [ 9714 3174 77159 672 0 9263 29965 ]
T [ 24921 77159 0 0 1155 3861 15106 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0498.1 MA0498 1 Meis1 Mus musculus
TALE-type homeo domain factors Homeo domain factors
MA0498.2 MA0498 2 MEIS1 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0062.1

ChIP-seq Centrality
log(P-value): -1658.51

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0062.1

ChIP-seq Centrality
log(P-value): -1783.78

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: