Detailed information of matrix profile MA0484.1

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Profile summary
Name: HNF4G
Matrix ID: MA0484.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 22383578
Uniprot ID: Q14541  
Pazar TF: TF0000903
TFBSshape ID: 288
TFencyclopedia IDs: 310
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 3514 3259 4696 1103 1944 1511 0 9343 7889 8464 99 324 225 159 6785 ]
C [ 1864 1531 102 201 713 2870 8827 55 82 0 6 143 4338 8377 794 ]
G [ 2011 3830 3811 7480 3301 2279 221 54 1481 938 9098 3624 1107 85 556 ]
T [ 2063 832 843 668 3494 2792 404 0 0 50 249 5361 3782 831 1317 ]

Binding sites information

   

TFBS profiles

External links

                   
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0484.1 MA0484 1 HNF4G Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     

log(P-value) = -6579

TFFM details

TFFM ID: TFFM0046.1

ChIP-seq Centrality
log(P-value): -9170.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0046.1

ChIP-seq Centrality
log(P-value): -9238.98

TFFM detailed summary logos

Description: hepatocyte nuclear factor 4,gamma

Alias: NR2A2

Symbol: HNF4G

Consensus:

Included Models:

GC Content: