Detailed information of matrix profile MA0137.3

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Profile summary
Name: STAT1
Matrix ID: MA0137.3
Class: STAT domain factors
Family: STAT factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 17558387
Uniprot ID: P42224  
Pazar TF: TF0000829
TFBSshape ID:
TFencyclopedia IDs: 148
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 366 0 0 361 109 1739 163 29 3620 3624 1879 ]
C [ 731 52 6 3262 2009 0 0 7 0 5 311 ]
G [ 785 0 110 6 0 1637 3466 3426 9 0 725 ]
T [ 1747 3577 3513 0 1511 253 0 167 0 0 714 ]

Binding sites information

   

TFBS profiles

No TFBSshape profile for this model.

External links

                   
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0137.1 MA0137 1 STAT1 Homo sapiens
STAT factors STAT domain factors
MA0137.2 MA0137 2 STAT1 Homo sapiens
STAT factors STAT domain factors
MA0137.3 MA0137 3 STAT1 Homo sapiens
STAT factors STAT domain factors
     

log(P-value) = -2937

TFFM details

TFFM ID: TFFM0101.1

ChIP-seq Centrality
log(P-value): -2467.92

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0101.1

ChIP-seq Centrality
log(P-value): -2522.71

TFFM detailed summary logos

Description: signal transducer and activator of transcription 1,91kDa

Alias: STAT91,ISGF-3

Symbol: STAT1

Consensus:

Included Models:

GC Content: