Detailed information of matrix profile MA0135.1

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Profile summary
Name: Lhx3
Matrix ID: MA0135.1
Class: Homeo domain factors
Family: HD-LIM factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: SELEX
Validation: 11602361
Uniprot ID: P50481  
Pazar TF: TF0000827
TFBSshape ID: 129
TFencyclopedia IDs: 720
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 9 16 19 0 0 19 20 2 0 16 9 2 2 ]
C [ 0 2 0 0 0 0 0 2 1 1 0 8 9 ]
G [ 3 2 0 0 0 0 0 0 0 0 3 0 3 ]
T [ 8 0 1 20 20 1 0 16 19 3 8 10 6 ]

Binding sites information

   

TFBS profiles

External links

                   
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0135.1 MA0135 1 Lhx3 Mus musculus
HD-LIM factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: LIM homeobox 3

Alias: -

Symbol: LHX3

Consensus:

Included Models:

GC Content: