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JASPAR
2018
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Detailed information of matrix profile
MA0135.1
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Matrix > MA0135.1
Profile summary
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Name:
Lhx3
Matrix ID:
MA0135.1
Class:
Homeo domain factors
Family:
HD-LIM factors
Collection:
CORE
Taxon:
Vertebrates
Species:
Mus musculus
Data Type:
SELEX
Validation:
11602361
Uniprot ID:
P50481
Pazar TF:
TF0000827
TFBSshape ID:
129
TFencyclopedia IDs:
720
Source:
Comment:
-
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
9
16
19
0
0
19
20
2
0
16
9
2
2
]
C [
0
2
0
0
0
0
0
2
1
1
0
8
9
]
G [
3
2
0
0
0
0
0
0
0
0
3
0
3
]
T [
8
0
1
20
20
1
0
16
19
3
8
10
6
]
Binding sites information
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA0135.1
MA0135
1
Lhx3
Mus musculus
HD-LIM factors
Homeo domain factors
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
LIM homeobox 3
Alias:
-
Symbol:
LHX3
Consensus:
Included Models:
GC Content: