Detailed information of matrix profile MA0111.1

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Profile summary
Name: Spz1
Matrix ID: MA0111.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: SELEX
Validation: 11165476
Uniprot ID: Q99MY0  
Pazar TF: TF0000079
TFBSshape ID: 107
TFencyclopedia IDs: 966
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 9 0 2 0 1 8 6 1 10 0 2 ]
C [ 0 2 0 0 0 0 0 9 0 1 8 ]
G [ 3 9 10 11 1 0 2 2 2 9 2 ]
T [ 0 1 0 1 10 4 4 0 0 2 0 ]

Binding sites information

   

TFBS profiles

External links

                   
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0111.1 MA0111 1 Spz1 Mus musculus
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: spermatogenic leucine zipper 1

Alias: NYD-TSP1,FLJ25709

Symbol: SPZ1

Consensus:

Included Models:

GC Content: