Detailed information of matrix profile MA0106.2

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Profile summary
Name: TP53
Matrix ID: MA0106.2
Class: p53 domain factors
Family: p53-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 1588974
Uniprot ID: P04637  
Pazar TF: TF0000077
TFBSshape ID: 104
TFencyclopedia IDs:
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 736 3 963 269 0 73 175 80 810 337 837 0 1013 178 36 ]
C [ 0 1191 45 11 0 597 818 919 162 45 0 1226 26 43 6 ]
G [ 469 5 29 33 1231 0 47 52 87 790 377 3 12 25 1186 ]
T [ 26 32 194 918 0 561 191 180 172 59 17 2 180 985 3 ]

Binding sites information

   

TFBS profiles

External links

              
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0106.1 MA0106 1 TP53 Homo sapiens
p53-related factors p53 domain factors
MA0106.2 MA0106 2 TP53 Homo sapiens
p53-related factors p53 domain factors
MA0106.3 MA0106 3 TP53 Homo sapiens
p53-related factors p53 domain factors
     

log(P-value) = -1652

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: tumor protein p53

Alias: p53,LFS1

Symbol: TP53

Consensus:

Included Models:

GC Content: