Detailed information of matrix profile MA0081.1

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Profile summary
Name: SPIB
Matrix ID: MA0081.1
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 7624145
Uniprot ID: Q01892  
Pazar TF: TF0000057
TFBSshape ID: 81
TFencyclopedia IDs: 529
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 31 4 24 2 1 48 47 ]
C [ 0 14 16 0 0 0 0 ]
G [ 0 29 7 47 47 0 0 ]
T [ 18 2 2 0 1 1 2 ]

Binding sites information

   

TFBS profiles

External links

                   
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0081.1 MA0081 1 SPIB Homo sapiens
Ets-related factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0204.1

ChIP-seq Centrality
log(P-value): -3889.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0204.1

ChIP-seq Centrality
log(P-value): -6465.19

TFFM detailed summary logos

Description: Spi-B transcription factor (Spi-1/PU.1 related)

Alias: SPI-B

Symbol: SPIB

Consensus:

Included Models:

GC Content: