Detailed information of matrix profile MA0079.1

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Profile summary
Name: SP1
Matrix ID: MA0079.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Krüppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 2192357
Uniprot ID: P08047  
Pazar TF: TF0000055
TFBSshape ID:
TFencyclopedia IDs: 841
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 1 2 0 0 0 2 0 0 1 2 ]
C [ 1 1 0 0 5 0 1 0 1 0 ]
G [ 4 4 8 8 2 4 5 6 6 0 ]
T [ 2 1 0 0 1 2 2 2 0 6 ]

Binding sites information

   

TFBS profiles

No TFBSshape profile for this model.

External links

                   
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0079.1 MA0079 1 SP1 Homo sapiens
Three-zinc finger Krüppel-related factors C2H2 zinc finger factors
MA0079.2 MA0079 2 SP1 Mus musculus
Rattus norvegicus
Homo sapiens
Three-zinc finger Krüppel-related factors C2H2 zinc finger factors
MA0079.3 MA0079 3 SP1 Homo sapiens
Three-zinc finger Krüppel-related factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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