Detailed information of matrix profile MA0046.2

Profile summary

Name: HNF1A
Matrix ID: MA0046.2
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9047360
Uniprot ID: P20823  
Pazar TF: TF0000925
TFBSshape ID:
TFencyclopedia IDs: 863
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 4475 914 174 1638 14149 14149 651 2518 14149 364 14 14149 14149 636 3009 ]
C [ 2275 655 1095 1337 4 845 339 4540 7 8 246 544 903 7168 3490 ]
G [ 3427 14149 695 237 228 13 9 3750 423 633 3 2170 1060 415 2441 ]
T [ 3972 1488 14149 14149 42 711 14149 3340 1274 14149 14149 2914 376 6981 5209 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.