Detailed information of matrix profile MA0037.2

  1. Home
  2. Matrix > MA0037.2

Profile summary
Name: GATA3
Matrix ID: MA0037.2
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8321207
Uniprot ID: P23771  
Pazar TF: TF0000024
TFBSshape ID: 41
TFencyclopedia IDs:
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 4628 0 4628 0 4628 4628 1290 2796 ]
C [ 0 0 0 0 0 0 0 712 ]
G [ 0 4628 0 0 0 0 3338 1120 ]
T [ 0 0 0 4628 0 0 0 0 ]

Binding sites information

   

TFBS profiles

External links

              
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0037.1 MA0037 1 GATA3 Homo sapiens
GATA-type zinc fingers Other C4 zinc finger-type factors
MA0037.2 MA0037 2 GATA3 Homo sapiens
GATA-type zinc fingers Other C4 zinc finger-type factors
MA0037.3 MA0037 3 GATA3 Homo sapiens
GATA-type zinc fingers Other C4 zinc finger-type factors
     

log(P-value) = -2293

TFFM details

TFFM ID: TFFM0042.1

ChIP-seq Centrality
log(P-value): -3539.75

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0042.1

ChIP-seq Centrality
log(P-value): -3761.22

TFFM detailed summary logos

Description: GATA binding protein 3

Alias: HDR

Symbol: GATA3

Consensus:

Included Models:

GC Content: