Detailed information of matrix profile MA0032.2

Profile summary

Name: FOXC1
Matrix ID: MA0032.2
Class: Fork head / winged helix factors
Family: Forkhead box (FOX) factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17993506
Uniprot ID: Q12948  
Pazar TF: TF0000020
TFBSshape ID:
TFencyclopedia IDs: 418
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 11787 184 9708 112 57 45 18489 51 10596 1386 12038 ]
C [ 1107 433 165 141 0 21 390 13631 2422 4165 304 ]
G [ 1558 27 8782 56 108 5372 1652 336 2008 728 772 ]
T [ 6702 18489 122 18489 18489 13117 2496 4858 7893 14324 6452 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.