Detailed information of matrix profile MA0029.1

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Profile summary
Name: Mecom
Matrix ID: MA0029.1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: SELEX
Validation: 8321231
Uniprot ID: A4QPC8  
Pazar TF: TF0000018
TFBSshape ID: 36
TFencyclopedia IDs:
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 14 20 0 27 1 27 26 0 27 0 24 23 6 15 ]
C [ 2 1 1 0 10 0 0 0 0 3 1 0 7 6 ]
G [ 6 2 25 0 0 0 1 27 0 0 0 4 7 3 ]
T [ 5 4 1 0 16 0 0 0 0 24 2 0 7 3 ]

Binding sites information

   

TFBS profiles

External links

              
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0029.1 MA0029 1 Mecom Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: MDS1 and EVI1 complex locus MDS1,EVI1

Alias: MDS1-EVI1,PRDM3

Symbol: MECOM

Consensus:

Included Models:

GC Content: