Detailed information of matrix profile MA0003.2

  1. Home
  2. Matrix > MA0003.2

Profile summary
Name: TFAP2A
Matrix ID: MA0003.2
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 16420676
Uniprot ID: P05549  
Pazar TF: TF0000002
TFBSshape ID: 264
TFencyclopedia IDs:
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 1387 2141 727 1517 56 0 0 62 346 3738 460 0 116 451 3146 ]
C [ 1630 1060 1506 519 1199 5098 4762 1736 2729 236 0 0 1443 3672 690 ]
G [ 851 792 884 985 3712 0 0 85 1715 920 4638 5098 3455 465 168 ]
T [ 1230 1105 1981 2077 131 0 336 3215 308 204 0 0 84 510 1094 ]

Binding sites information

   

TFBS profiles

External links

              
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0003.1 MA0003 1 TFAP2A Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
MA0003.2 MA0003 2 TFAP2A Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
MA0003.3 MA0003 3 TFAP2A Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
     

log(P-value) = -4343

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)

Alias: AP-2

Symbol: TFAP2A

Consensus:

Included Models:

GC Content: