Matrix Details
This API provides an easy-to-use REST web interface to query/retrieve matrix
profile data from the latest version of the JASPAR database. The API comes
with a human browsable interface and also a programmatic interface which
return the results in eight different formats, including
json
,
jsonp
, jaspar
, meme
,
transfac
, pfm
, yaml
and
bed
.
GET /api/v1/matrix/PF0139.1/?format=api
https://jaspar2018.genereg.net/static/logos/svg/PF0139.1.svg", "base_id": "PF0139", "jaspar": "FOXI1", "family": [], "versions_url": "https://jaspar2018.genereg.net/api/v1/matrix/PF0139/versions" }{ "species": [], "matrix_id": "PF0139.1", "sites_url": null, "tffm": null, "mcs": "11.0", "comment": "-", "type": "phylogenetic", "pubmed_ids": [ "15735639" ], "version": 1, "tfe_id": [], "class": [ "Unknown" ], "name": "AAAYWAACM", "collection": "PHYLOFACTS", "uniprot_ids": [], "pazar_tf_id": [], "pazar_tf_ids": [], "tax_group": "vertebrates", "tfe_ids": [], "medline": [ "15735639" ], "transfac": "HFH-4", "pfm": { "A": [ 776.0, 776.0, 776.0, 0.0, 657.0, 776.0, 776.0, 0.0, 578.0 ], "T": [ 0.0, 0.0, 0.0, 361.0, 119.0, 0.0, 0.0, 0.0, 0.0 ], "G": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "C": [ 0.0, 0.0, 0.0, 415.0, 0.0, 0.0, 0.0, 776.0, 198.0 ] }, "sequence_logo": "