Browsable API
Matrix Details
This is JASPAR browsable API, which provides easy-to-use REST web interface to query/retrieve matrix profile data from JASPAR database. The API comes with a human browsable interface and also programmatic interface, which return the results in eight different formats, including
json
, jsonp
, jaspar
, transfac
, pfm
, meme
and yaml
, bed
and also api
for browsable interface.
API endpoint that returns the matrix profile detail information.
GET /api/v1/matrix/PF0108.1/?format=api
HTTP 200 OK
Vary: Accept
Content-Type: text/html; charset=utf-8
Allow: GET, HEAD, OPTIONS
{
"comment": "-",
"pubmed_ids": [
"15735639"
],
"family": [],
"pfm": {
"A": [
604.0,
604.0,
0.0,
128.0,
510.0,
0.0,
604.0,
604.0,
157.0,
0.0
],
"C": [
0.0,
0.0,
604.0,
0.0,
0.0,
604.0,
0.0,
0.0,
227.0,
0.0
],
"T": [
0.0,
0.0,
0.0,
476.0,
94.0,
0.0,
0.0,
0.0,
118.0,
440.0
],
"G": [
0.0,
0.0,
0.0,
0.0,
0.0,
0.0,
0.0,
0.0,
102.0,
164.0
]
},
"tax_group": "vertebrates",
"matrix_id": "PF0108.1",
"sequence_logo": "http://jaspar2018.genereg.net/static/logos/svg/PF0108.1.svg",
"pazar_tf_ids": [],
"versions_url": "http://jaspar2018.genereg.net/api/v1/matrix/PF0108/versions",
"collection": "PHYLOFACTS",
"base_id": "PF0108",
"jaspar": "-",
"mcs": "12.7",
"class": [
"Unknown"
],
"tfe_ids": [],
"name": "AACWWCAANK",
"tffm": null,
"sites_url": null,
"species": [],
"uniprot_ids": [],
"version": 1,
"transfac": "FAC1(*)",
"type": "phylogenetic"
}