Matrix Details
This API provides an easy-to-use REST web interface to query/retrieve matrix
profile data from the latest version of the JASPAR database. The API comes
with a human browsable interface and also a programmatic interface which
return the results in eight different formats, including
json
,
jsonp
, jaspar
, meme
,
transfac
, pfm
, yaml
and
bed
.
GET /api/v1/matrix/PF0063.1/?format=api
https://jaspar2018.genereg.net/static/logos/svg/PF0063.1.svg", "base_id": "PF0063", "jaspar": "-", "family": [], "versions_url": "https://jaspar2018.genereg.net/api/v1/matrix/PF0063/versions" }{ "species": [], "matrix_id": "PF0063.1", "sites_url": null, "tffm": null, "mcs": "19.1", "comment": "-", "type": "phylogenetic", "pubmed_ids": [ "15735639" ], "version": 1, "tfe_id": [], "class": [ "Unknown" ], "name": "AAGWWRNYGGC", "collection": "PHYLOFACTS", "uniprot_ids": [], "pazar_tf_id": [], "pazar_tf_ids": [], "tax_group": "vertebrates", "tfe_ids": [], "medline": [ "15735639" ], "transfac": "-", "pfm": { "A": [ 536.0, 536.0, 0.0, 444.0, 95.0, 76.0, 44.0, 0.0, 0.0, 0.0, 0.0 ], "T": [ 0.0, 0.0, 0.0, 92.0, 441.0, 0.0, 39.0, 167.0, 0.0, 0.0, 0.0 ], "G": [ 0.0, 0.0, 536.0, 0.0, 0.0, 460.0, 416.0, 0.0, 536.0, 536.0, 0.0 ], "C": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 37.0, 369.0, 0.0, 0.0, 536.0 ] }, "sequence_logo": "