JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA0265.1/?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "species": [
        {
            "tax_id": 4932,
            "name": "Saccharomyces cerevisiae"
        }
    ],
    "matrix_id": "MA0265.1",
    "sites_url": null,
    "type": "PBM, CSA and/or DIP-chip",
    "pubmed_ids": [
        "19111667"
    ],
    "version": 1,
    "tfe_id": [],
    "class": [],
    "name": "ABF1",
    "collection": "CORE",
    "uniprot_ids": [
        "P14164"
    ],
    "pazar_tf_id": [],
    "pazar_tf_ids": [],
    "family": [],
    "tfe_ids": [],
    "medline": [
        "19111667"
    ],
    "tffm": null,
    "pfm": {
        "A": [
            11.0,
            0.0,
            0.0,
            0.0,
            41.0,
            22.0,
            39.0,
            34.0,
            40.0,
            41.0,
            12.0,
            0.0,
            92.0,
            0.0,
            37.0,
            34.0
        ],
        "T": [
            44.0,
            1.0,
            0.0,
            99.0,
            20.0,
            28.0,
            17.0,
            28.0,
            15.0,
            0.0,
            55.0,
            19.0,
            0.0,
            46.0,
            23.0,
            34.0
        ],
        "G": [
            4.0,
            0.0,
            99.0,
            0.0,
            22.0,
            26.0,
            28.0,
            20.0,
            24.0,
            57.0,
            9.0,
            81.0,
            0.0,
            9.0,
            18.0,
            14.0
        ],
        "C": [
            41.0,
            99.0,
            0.0,
            0.0,
            17.0,
            24.0,
            16.0,
            18.0,
            21.0,
            0.0,
            25.0,
            0.0,
            8.0,
            45.0,
            22.0,
            18.0
        ]
    },
    "sequence_logo": "https://jaspar2018.genereg.net/static/logos/svg/MA0265.1.svg",
    "base_id": "MA0265",
    "tax_group": "fungi",
    "versions_url": "https://jaspar2018.genereg.net/api/v1/matrix/MA0265/versions"
}

Matrix Details