Detailed information of matrix profile PH0176.1

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Profile summary
Name: Vsx1
Matrix ID: PH0176.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q91V10  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 23 15 50 37 6 1 98 98 1 0 90 63 14 33 56 24 15 ]
C [ 53 33 23 6 29 10 1 0 1 0 0 1 28 19 24 23 19 ]
G [ 11 38 9 49 1 0 0 1 0 1 10 29 12 26 14 18 17 ]
T [ 14 13 18 8 63 90 0 1 98 98 1 6 46 23 7 36 49 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0176.1 PH0176 1 Vsx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: