Detailed information of matrix profile PH0175.1

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Profile summary
Name: Vax2
Matrix ID: PH0175.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9WTP9  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 16 32 26 17 53 6 1 88 98 1 0 93 50 8 34 17 ]
C [ 24 16 26 43 13 56 11 11 0 0 0 0 19 23 21 58 ]
G [ 31 19 27 21 26 12 0 0 0 0 2 3 25 41 31 17 ]
T [ 30 33 21 18 8 25 88 0 1 99 98 3 6 28 13 9 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0175.1 PH0175 1 Vax2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: