Detailed information of matrix profile PH0173.1

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Profile summary
Name: Uncx
Matrix ID: PH0173.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q78DU3  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 30 35 23 48 63 1 1 98 98 1 0 93 83 15 18 17 13 ]
C [ 31 21 17 16 17 15 6 1 0 1 1 0 1 36 18 37 15 ]
G [ 27 23 13 20 11 1 0 1 1 0 1 6 15 22 47 31 56 ]
T [ 11 21 47 16 9 83 93 0 1 98 98 1 1 27 17 16 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0173.1 PH0173 1 Uncx Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: