Detailed information of matrix profile PH0163.1

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Profile summary
Name: Six3
Matrix ID: PH0163.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q62233  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 72 23 47 7 2 16 0 97 0 1 92 19 25 40 34 8 ]
C [ 9 8 5 10 7 2 1 0 0 0 97 3 45 23 8 22 11 ]
G [ 36 8 17 32 82 90 83 4 3 0 0 3 9 20 11 18 24 ]
T [ 21 12 55 10 4 7 0 95 0 99 1 2 27 32 40 27 58 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0163.1 PH0163 1 Six3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: