Detailed information of matrix profile PH0158.1

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Profile summary
Name: Rhox11_2
Matrix ID: PH0158.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q810N8  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 9 15 23 35 14 39 98 2 98 0 2 23 21 33 17 22 ]
C [ 9 44 35 40 2 3 0 0 95 1 13 93 7 19 38 30 14 ]
G [ 15 19 29 13 10 3 1 1 0 0 78 1 56 27 10 24 14 ]
T [ 42 28 21 24 53 80 60 1 3 1 9 4 14 33 18 28 50 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0158.1 PH0158 1 Rhox11_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: