Detailed information of matrix profile PH0151.1

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Profile summary
Name: Pou6f1_1
Matrix ID: PH0151.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q07916  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 23 21 38 64 12 3 0 29 99 1 1 98 42 9 21 25 10 ]
C [ 16 38 30 3 40 96 0 70 0 0 0 0 2 46 22 8 34 ]
G [ 32 17 15 13 40 1 0 0 0 0 0 0 7 27 30 24 28 ]
T [ 30 24 17 21 8 1 99 1 0 99 98 1 50 19 28 43 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0151.1 PH0151 1 Pou6f1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: