Detailed information of matrix profile PH0151.1

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Profile summary
Name: Pou6f1_1
Matrix ID: PH0151.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q07916  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 28 43 28 19 50 1 98 99 0 1 99 1 8 21 17 24 30 ]
C [ 28 24 30 27 7 0 0 0 0 0 0 1 40 13 15 17 32 ]
G [ 34 8 22 46 2 0 0 0 0 70 0 96 40 3 30 38 16 ]
T [ 10 25 21 9 42 98 1 1 99 29 0 3 12 64 38 21 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0151.1 PH0151 1 Pou6f1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: