Detailed information of matrix profile PH0100.1

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Profile summary
Name: Lmx1a
Matrix ID: PH0100.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9JKU8  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 26 27 30 35 6 3 94 96 3 5 93 77 32 23 14 8 ]
C [ 17 15 7 5 9 13 4 1 0 0 1 0 4 13 16 48 25 ]
G [ 34 37 18 12 6 4 0 1 0 0 1 4 13 13 18 21 51 ]
T [ 17 22 48 52 50 77 93 5 3 96 94 3 6 42 43 17 16 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0100.1 PH0100 1 Lmx1a Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: