Detailed information of matrix profile PH0096.1

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Profile summary
Name: Lhx6_1
Matrix ID: PH0096.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9R1R0  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 44 26 50 6 1 83 98 0 0 88 47 6 12 18 33 15 ]
C [ 6 22 41 27 46 12 1 0 1 16 0 2 53 9 34 15 38 ]
G [ 10 28 11 13 2 0 16 1 0 1 12 46 11 56 19 12 31 ]
T [ 52 6 22 11 47 88 0 0 98 83 1 6 31 24 28 40 16 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0096.1 PH0096 1 Lhx6_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: