Detailed information of matrix profile PH0088.1

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Profile summary
Name: Isl2
Matrix ID: PH0088.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9CXV0  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 43 44 44 9 6 97 97 1 2 47 55 9 14 13 28 9 ]
C [ 8 14 31 21 1 0 0 1 2 1 9 5 13 12 9 7 ]
G [ 28 10 11 4 0 1 1 28 36 51 30 12 15 35 25 46 ]
T [ 20 32 15 66 93 1 1 71 60 2 6 74 58 40 37 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0088.1 PH0088 1 Isl2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: