Detailed information of matrix profile PH0085.1

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Profile summary
Name: Irx4
Matrix ID: PH0085.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9QY61  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 24 25 30 14 33 91 1 90 8 5 6 63 24 31 24 33 ]
C [ 15 24 13 16 10 1 1 94 0 2 1 2 4 26 19 23 14 ]
G [ 14 32 11 8 19 4 2 1 2 0 94 1 1 23 20 18 8 ]
T [ 39 20 51 46 56 63 6 5 8 90 1 91 33 27 30 35 45 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0085.1 PH0085 1 Irx4 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: